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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs55941518 chr10:54477502 G/A HIST2H4A chr1:149804223-149811339:+ -0.51 -5.94 5.45E-9 Box Plot
THCA rs55959239 chr2:132206316 C/A CCDC74B chr2:130896860-130902707:- 0.36 6.55 1.47E-10 Box Plot
THCA rs55961611 chr7:140135999 G/A LOC441455 chr9:99488103-99489749:+ 0.51 6.68 6.47E-11 Box Plot
THCA rs55962013 chr11:77628968 G/A INTS4L1 chr7:64601603-64694600:+ 0.71 11.26 2.88E-26 Box Plot
THCA rs55963543 chr10:45802587 C/T AGAP8 chr10:51224681-51371321:- 0.46 6.13 1.89E-9 Box Plot
THCA rs55965226 chr8:10137930 G/T SGK223 chr8:8175258-8244008:- 0.37 6.06 2.76E-9 Box Plot
THCA rs55977920 chr3:125773500 ATTACCT/A ROPN1 chr3:123687368-123711025:- 0.33 6.17 1.42E-9 Box Plot
THCA rs56006261 chr7:66349429 G/A CCT6P1 chr7:65216129-65228341:+ 0.44 6.76 3.98E-11 Box Plot
THCA rs56022117 chr22:24054665 G/C IGLL3 chr22:25713888-25716191:+ 0.7 9.82 7.56E-21 Box Plot
THCA rs56044884 chr2:113029058 A/G RGPD5 chr2:110550335-110615272:+ -0.48 -6.91 1.58E-11 Box Plot
THCA rs56046902 chr14:39884876 T/G LOC647288 chr13:75811890-75814517:- -0.48 -8.67 6.62E-17 Box Plot
THCA rs56048537 chr2:113078467 G/T RGPD5 chr2:110550335-110615272:+ -0.47 -6.88 1.86E-11 Box Plot
THCA rs56052312 chr8:10853035 C/T SGK223 chr8:8175258-8244008:- 0.4 7.1 4.65E-12 Box Plot
THCA rs56059991 chr7:140169940 G/A LOC441455 chr9:99488103-99489749:+ 0.48 6.29 7.18E-10 Box Plot
THCA rs560638 chr8:9882767 A/G SGK223 chr8:8175258-8244008:- 0.37 7.22 2.01E-12 Box Plot